Pseudomonas_E avellanae
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E avellanae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas syringae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas syringae group; x__Pseudomonas syringae group genomosp. 1; s__Pseudomonas syringae; x__Pseudomonas syringae group pathovars incertae sedis; x__Pseudomonas syringae pv. actinidiae; x__Pseudomonas syringae pv. actinidiae str. M302091
NCBI Strain Identifiers M302091
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000444135.1)
Genome Characteristics
CheckM Completeness 97.14%
CheckM Contamination 0.54%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 941
N50 Contigs 14,086 bp
Longest Contig 48,124 bp
Scaffold Count 414
N50 Scaffolds 65,466 bp
Longest Scaffold 217,822 bp
Genome Size 5,901,732 bp
Protein Count 5,659
Coding Density 84.70%
GC Percentage 58.84%
Ambiguous Bases N/A
GTDB representative GCA_000444135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM14586v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471320
Country None
Date 2010-08-25
Genbank Assembly Accession GCA_000145865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 5,846
Refseq Category na
Seq Rel Date 2010/08/25
Spanned Gaps 527
Species Taxid 317
SSU Count 1
Submitter University of North Carolina at Chapel Hill
Taxid 629266
Total Gap Length 52700
Translation Table 11
tRNA Count (total) 39
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AEAL00000000.1