Cutibacterium acnes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Propionibacteriaceae; g__Cutibacterium; s__Cutibacterium acnes
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Propionibacteriaceae; g__Cutibacterium; s__Cutibacterium acnes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Propionibacteriaceae; g__Cutibacterium; s__Cutibacterium acnes; x__Cutibacterium acnes HL087PA3
NCBI Strain Identifiers HL087PA3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003030305.1)
Genome Characteristics
CheckM Completeness 99.43%
CheckM Contamination 0.03%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 29
N50 Contigs 606,756 bp
Longest Contig 888,440 bp
Scaffold Count 20
N50 Scaffolds 784,213 bp
Longest Scaffold 910,256 bp
Genome Size 2,516,818 bp
Protein Count 2,357
Coding Density 89.81%
GC Percentage 60.10%
Ambiguous Bases N/A
GTDB representative GCA_003030305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM14448v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00189245
Country None
Date 2010-08-05
Genbank Assembly Accession GCA_000144485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count 1
CDS Count 2,498
Refseq Category na
Seq Rel Date 2010/08/05
Spanned Gaps 9
Species Taxid 1747
SSU Count 1
Submitter Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine
Taxid 765083
Total Gap Length 290
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADYA00000000.1