Cutibacterium acnes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Propionibacteriaceae; g__Cutibacterium; s__Cutibacterium acnes
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Propionibacteriaceae; g__Cutibacterium; s__Cutibacterium acnes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Propionibacteriaceae; g__Cutibacterium; s__Cutibacterium acnes; x__Cutibacterium acnes HL072PA1
NCBI Strain Identifiers HL072PA1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003030305.1)
Genome Characteristics
CheckM Completeness 99.43%
CheckM Contamination 0.03%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 34
N50 Contigs 222,122 bp
Longest Contig 341,477 bp
Scaffold Count 22
N50 Scaffolds 690,987 bp
Longest Scaffold 716,207 bp
Genome Size 2,524,164 bp
Protein Count 2,362
Coding Density 89.81%
GC Percentage 60.10%
Ambiguous Bases N/A
GTDB representative GCA_003030305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM14424v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00189234
Country None
Date 2010-08-04
Genbank Assembly Accession GCA_000144245.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count 1
CDS Count 2,510
Refseq Category na
Seq Rel Date 2010/08/04
Spanned Gaps 12
Species Taxid 1747
SSU Count 1
Submitter Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine
Taxid 765074
Total Gap Length 225
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADZF00000000.1