Regiella insecticola
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Regiella; s__Regiella insecticola
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Candidatus Regiella; s__Candidatus Regiella insecticola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; x__unclassified Enterobacteriaceae; x__ant, tsetse, mealybug, aphid, etc. endosymbionts; x__aphid secondary symbionts; g__Candidatus Regiella; s__Candidatus Regiella insecticola; x__Candidatus Regiella insecticola LSR1
NCBI Strain Identifiers LSR1
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.39%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 19
Contig Count 215
N50 Contigs 102,709 bp
Longest Contig 350,871 bp
Scaffold Count 173
N50 Scaffolds 227,596 bp
Longest Scaffold 652,272 bp
Genome Size 2,067,400 bp
Protein Count 2,342
Coding Density 81.70%
GC Percentage 42.47%
Ambiguous Bases 2
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM14362v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471564
Country USA: Ithaca; NY
Date 2010-08-19
Genbank Assembly Accession GCA_000143625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 2,145
Refseq Category na
Seq Rel Date 2010/08/19
Spanned Gaps 42
Species Taxid 138073
SSU Count 4
Submitter International Aphid Genomics Consortium
Taxid 663321
Total Gap Length 1506
Translation Table 11
tRNA Count (total) 41
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACYF00000000.1