Brachyspira murdochii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Brachyspirae; o__Brachyspirales; f__Brachyspiraceae; g__Brachyspira; s__Brachyspira murdochii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Brachyspirales; f__Brachyspiraceae; g__Brachyspira; s__Brachyspira murdochii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Brachyspirales; f__Brachyspiraceae; g__Brachyspira; s__Brachyspira murdochii; x__Brachyspira murdochii DSM 12563
NCBI Strain Identifiers DSM 12563
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.2%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 3,241,804 bp
Longest Contig 3,241,804 bp
Scaffold Count 1
N50 Scaffolds 3,241,804 bp
Longest Scaffold 3,241,804 bp
Genome Size 3,241,804 bp
Protein Count 2,868
Coding Density 86.82%
GC Percentage 27.75%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM9284v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00001910
Country Canada
Date 2010-5-13
Genbank Assembly Accession GCA_000092845.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source intestinal contents of healthy swine
Latitude Longitude 52.939 N 73.549 W
Molecule Count 1
CDS Count 2,827
Refseq Category representative genome
Seq Rel Date 2010/05/13
Spanned Gaps 0
Species Taxid 84378
SSU Count 1
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 526224
Total Gap Length 0
Translation Table 11
tRNA Count (total) 34
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None