Salinibacter ruber
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Rhodothermia; o__Rhodothermales; f__Salinibacteraceae; g__Salinibacter; s__Salinibacter ruber
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__; o__Bacteroidetes Order II. Incertae sedis; f__Rhodothermaceae; g__Salinibacter; s__Salinibacter ruber
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; o__Bacteroidetes Order II. Incertae sedis; f__Rhodothermaceae; g__Salinibacter; s__Salinibacter ruber; x__Salinibacter ruber M8
NCBI Strain Identifiers M8
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000013045.1)
Genome Characteristics
CheckM Completeness 96.51%
CheckM Contamination 1.74%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 5
N50 Contigs 3,619,447 bp
Longest Contig 3,619,447 bp
Scaffold Count 5
N50 Scaffolds 3,619,447 bp
Longest Scaffold 3,619,447 bp
Genome Size 3,832,918 bp
Protein Count 3,228
Coding Density 84.65%
GC Percentage 65.85%
Ambiguous Bases N/A
GTDB representative GCA_000013045.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM9040v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3138292
Country None
Date 2010-5-11
Genbank Assembly Accession GCA_000090405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 5
CDS Count 3,165
Refseq Category na
Seq Rel Date 2010/05/11
Spanned Gaps 0
Species Taxid 146919
SSU Count 1
Submitter Genoscope
Taxid 761659
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None