Mycobacterium abscessus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium abscessus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacteroides; s__Mycobacteroides abscessus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacteroides; s__Mycobacteroides abscessus
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species True (1,673 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 2
N50 Contigs 5,067,172 bp
Longest Contig 5,067,172 bp
Scaffold Count 2
N50 Scaffolds 5,067,172 bp
Longest Scaffold 5,067,172 bp
Genome Size 5,090,491 bp
Protein Count 4,993
Coding Density 92.71%
GC Percentage 64.15%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM6918v1
Assembly Type n/a
Bioproject PRJNA61613
Biosample SAMEA3138276
Country None
Date 2008-03-01
Genbank Assembly Accession GCA_000069185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 4,942
Refseq Category reference genome
Seq Rel Date 2008/03/01
Spanned Gaps 0
Species Taxid 36809
SSU Count 1
Submitter Genoscope
Taxid 36809
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None