Flavobacterium psychrophilum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum; x__Flavobacterium psychrophilum JIP02/86
NCBI Strain Identifiers 86;JIP02;JIP02/86
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002217405.1)
Genome Characteristics
CheckM Completeness 99.29%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 2,860,382 bp
Longest Contig 2,860,382 bp
Scaffold Count 1
N50 Scaffolds 2,860,382 bp
Longest Scaffold 2,860,382 bp
Genome Size 2,860,382 bp
Protein Count 2,514
Coding Density 86.95%
GC Percentage 32.53%
Ambiguous Bases N/A
GTDB representative GCA_002217405.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM6430v2
Assembly Type n/a
Bioproject PRJNA61627
Biosample SAMEA3138269
Country None
Date 2013-5-30
Genbank Assembly Accession GCA_000064305.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 2,446
Refseq Category reference genome
Seq Rel Date 2013/05/30
Spanned Gaps 0
Species Taxid 96345
SSU Count 6
Submitter I.N.R.A., FRANCE
Taxid 402612
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None