Citrobacter_A rodentium
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter_A; s__Citrobacter_A rodentium
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter rodentium
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter rodentium; x__Citrobacter rodentium ICC168
NCBI Strain Identifiers ICC168
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000759815.1)
Genome Characteristics
CheckM Completeness 99.91%
CheckM Contamination 0.13%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 4
N50 Contigs 5,346,659 bp
Longest Contig 5,346,659 bp
Scaffold Count 4
N50 Scaffolds 5,346,659 bp
Longest Scaffold 5,346,659 bp
Genome Size 5,444,283 bp
Protein Count 5,059
Coding Density 87.20%
GC Percentage 54.55%
Ambiguous Bases N/A
GTDB representative GCA_000759815.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM2708v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272524
Country None
Date 2010-1-4
Genbank Assembly Accession GCA_000027085.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 4
CDS Count 5,237
Refseq Category na
Seq Rel Date 2010/01/04
Spanned Gaps 0
Species Taxid 67825
SSU Count 7
Submitter Wellcome Trust Sanger Institute
Taxid 637910
Total Gap Length 0
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None