| GTDB Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli_D |
|---|---|
| Filtered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli |
| Unfiltered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli UMN026 |
| NCBI Strain Identifiers | UMN026 |
| GTDB Type Material Designation | not type material |
| GTDB Representative of Species | True (1,679 genomes in species cluster) |
| CheckM Completeness | 99.97% |
|---|---|
| CheckM Contamination | 0.09% |
| CheckM Strain Heterogeneity | 0.0 |
| 5S Count | 7 |
| 16S Count | 7 |
| 23S Count | 7 |
| tRNA Count | 20 |
| Contig Count | 4 |
| N50 Contigs | 5,202,090 bp |
| Longest Contig | 5,202,090 bp |
| Scaffold Count | 3 |
| N50 Scaffolds | 5,202,090 bp |
| Longest Scaffold | 5,202,090 bp |
| Genome Size | 5,358,200 bp |
| Protein Count | 5,021 |
| Coding Density | 87.78% |
| GC Percentage | 50.66% |
| Ambiguous Bases | N/A |
| GTDB representative of species | True |
| Assembly Level | Chromosome |
|---|---|
| Assembly Name | ASM2632v2 |
| Assembly Type | n/a |
| Bioproject | PRJNA62981 |
| Biosample | SAMEA3138233 |
| Country | None |
| Date | 2008-12-18 |
| Genbank Assembly Accession | GCA_000026325.2 |
| Genome Category | Isolate |
| Genome Representation | full |
| Isolate | None |
| Isolation Source | None |
| Latitude Longitude | None |
| Molecule Count | 3 |
| CDS Count | 5,018 |
| Refseq Category | reference genome |
| Seq Rel Date | 2008/12/18 |
| Spanned Gaps | 1 |
| Species Taxid | 562 |
| SSU Count | 0 |
| Submitter | Genoscope |
| Taxid | 585056 |
| Total Gap Length | 53 |
| Translation Table | 11 |
| tRNA Count (total) | 88 |
| Type Material | None |
| Unspanned Gaps | 0 |
| Version Status | latest |
| WGS Master | None |