GTDB Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli_D |
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Filtered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli |
Unfiltered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli UMN026 |
NCBI Strain Identifiers | UMN026 |
GTDB Type Material Designation | not type material |
GTDB Representative of Species | True (1,679 genomes in species cluster) |
CheckM Completeness | 99.97% |
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CheckM Contamination | 0.09% |
CheckM Strain Heterogeneity | 0.0 |
5S Count | 7 |
16S Count | 7 |
23S Count | 7 |
tRNA Count | 20 |
Contig Count | 4 |
N50 Contigs | 5,202,090 bp |
Longest Contig | 5,202,090 bp |
Scaffold Count | 3 |
N50 Scaffolds | 5,202,090 bp |
Longest Scaffold | 5,202,090 bp |
Genome Size | 5,358,200 bp |
Protein Count | 5,021 |
Coding Density | 87.78% |
GC Percentage | 50.66% |
Ambiguous Bases | N/A |
GTDB representative of species | True |
Assembly Level | Chromosome |
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Assembly Name | ASM2632v2 |
Assembly Type | n/a |
Bioproject | PRJNA62981 |
Biosample | SAMEA3138233 |
Country | None |
Date | 2008-12-18 |
Genbank Assembly Accession | GCA_000026325.2 |
Genome Category | Isolate |
Genome Representation | full |
Isolate | None |
Isolation Source | None |
Latitude Longitude | None |
Molecule Count | 3 |
CDS Count | 5,018 |
Refseq Category | reference genome |
Seq Rel Date | 2008/12/18 |
Spanned Gaps | 1 |
Species Taxid | 562 |
SSU Count | 0 |
Submitter | Genoscope |
Taxid | 585056 |
Total Gap Length | 53 |
Translation Table | 11 |
tRNA Count (total) | 88 |
Type Material | None |
Unspanned Gaps | 0 |
Version Status | latest |
WGS Master | None |