Aminobacterium colombiense
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Synergistota; c__Synergistia; o__Synergistales; f__Aminobacteriaceae; g__Aminobacterium; s__Aminobacterium colombiense
Filtered NCBI Taxonomy d__Bacteria; p__Synergistetes; c__Synergistia; o__Synergistales; f__Synergistaceae; g__Aminobacterium; s__Aminobacterium colombiense
Unfiltered NCBI Taxonomy d__Bacteria; p__Synergistetes; c__Synergistia; o__Synergistales; f__Synergistaceae; g__Aminobacterium; s__Aminobacterium colombiense; x__Aminobacterium colombiense DSM 12261
NCBI Strain Identifiers DSM 12261
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (4 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 1,980,592 bp
Longest Contig 1,980,592 bp
Scaffold Count 1
N50 Scaffolds 1,980,592 bp
Longest Scaffold 1,980,592 bp
Genome Size 1,980,592 bp
Protein Count 1,914
Coding Density 91.43%
GC Percentage 45.31%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM2588v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02598488
Country Colombia
Date 2010-4-5
Genbank Assembly Accession GCA_000025885.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 1,884
Refseq Category representative genome
Seq Rel Date 2010/04/05
Spanned Gaps 0
Species Taxid 81468
SSU Count 3
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 572547
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None