Stackebrandtia nassauensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Micromonosporaceae; g__Stackebrandtia; s__Stackebrandtia nassauensis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Glycomycetales; f__Glycomycetaceae; g__Stackebrandtia; s__Stackebrandtia nassauensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Glycomycetales; f__Glycomycetaceae; g__Stackebrandtia; s__Stackebrandtia nassauensis; x__Stackebrandtia nassauensis DSM 44728
NCBI Strain Identifiers DSM 44728
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.75%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 6,841,557 bp
Longest Contig 6,841,557 bp
Scaffold Count 1
N50 Scaffolds 6,841,557 bp
Longest Scaffold 6,841,557 bp
Genome Size 6,841,557 bp
Protein Count 6,441
Coding Density 91.24%
GC Percentage 68.13%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM2454v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02598427
Country Bahamas: Nassau
Date 2010-3-5
Genbank Assembly Accession GCA_000024545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 25.066127 N 77.339025 W
Molecule Count 1
CDS Count 6,421
Refseq Category representative genome
Seq Rel Date 2010/03/05
Spanned Gaps 0
Species Taxid 283811
SSU Count 2
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 446470
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None