Saccharolobus islandicus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Thermoproteota; c__Thermoproteia; o__Sulfolobales; f__Sulfolobaceae; g__Saccharolobus; s__Saccharolobus islandicus
Filtered NCBI Taxonomy d__Archaea; p__Crenarchaeota; c__Thermoprotei; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus islandicus
Unfiltered NCBI Taxonomy d__Archaea; x__TACK group; p__Crenarchaeota; c__Thermoprotei; o__Sulfolobales; f__Sulfolobaceae; g__Sulfolobus; s__Sulfolobus islandicus; x__Sulfolobus islandicus L.D.8.5
NCBI Strain Identifiers L.D.8.5
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000022385.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 3
N50 Contigs 1,357,119 bp
Longest Contig 1,364,903 bp
Scaffold Count 2
N50 Scaffolds 2,722,032 bp
Longest Scaffold 2,722,032 bp
Genome Size 2,748,647 bp
Protein Count 3,116
Coding Density 87.66%
GC Percentage 35.26%
Ambiguous Bases N/A
GTDB representative GCA_000022385.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM2430v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02598413
Country USA
Date 2010-1-22
Genbank Assembly Accession GCA_000024305.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 40.49703 N 121.42752 W
Molecule Count 2
CDS Count 2,989
Refseq Category na
Seq Rel Date 2010/01/22
Spanned Gaps 1
Species Taxid 43080
SSU Count 1
Submitter US DOE Joint Genome Institute
Taxid 425944
Total Gap Length 10
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None