Exiguobacterium profundum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Exiguobacterales; f__Exiguobacteraceae; g__Exiguobacterium; s__Exiguobacterium profundum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__; g__Exiguobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; x__Bacillales incertae sedis; x__Bacillales Family XII. Incertae Sedis; g__Exiguobacterium; s__Exiguobacterium sp. AT1b
NCBI Strain Identifiers AT1b
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001909285.1)
Genome Characteristics
CheckM Completeness 99.34%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 9
23S Count 9
tRNA Count 20
Contig Count 1
N50 Contigs 2,999,895 bp
Longest Contig 2,999,895 bp
Scaffold Count 1
N50 Scaffolds 2,999,895 bp
Longest Scaffold 2,999,895 bp
Genome Size 2,999,895 bp
Protein Count 3,044
Coding Density 90.09%
GC Percentage 48.46%
Ambiguous Bases N/A
GTDB representative GCA_001909285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM2304v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02598453
Country USA
Date 2009-5-5
Genbank Assembly Accession GCA_000023045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 3,008
Refseq Category na
Seq Rel Date 2009/05/05
Spanned Gaps 0
Species Taxid 360911
SSU Count 9
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 360911
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None