Clostridium_F botulinum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium_F; s__Clostridium_F botulinum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum; x__Clostridium botulinum A; x__Clostridium botulinum A2 str. Kyoto
NCBI Strain Identifiers Kyoto
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001276985.1)
Genome Characteristics
CheckM Completeness 99.31%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 9
23S Count 9
tRNA Count 20
Contig Count 1
N50 Contigs 4,155,278 bp
Longest Contig 4,155,278 bp
Scaffold Count 1
N50 Scaffolds 4,155,278 bp
Longest Scaffold 4,155,278 bp
Genome Size 4,155,278 bp
Protein Count 3,836
Coding Density 81.58%
GC Percentage 28.21%
Ambiguous Bases N/A
GTDB representative GCA_001276985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM2276v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603540
Country Japan: Kyoto
Date 2009-4-15
Genbank Assembly Accession GCA_000022765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source infant botulism case
Latitude Longitude None
Molecule Count 1
CDS Count 3,904
Refseq Category na
Seq Rel Date 2009/04/15
Spanned Gaps 0
Species Taxid 1491
SSU Count 9
Submitter Los Alamos National Laboratory
Taxid 536232
Total Gap Length 0
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None