Thermodesulfovibrio yellowstonii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Nitrospirota; c__Thermodesulfovibrionia; o__Thermodesulfovibrionales; f__Thermodesulfovibrionaceae; g__Thermodesulfovibrio; s__Thermodesulfovibrio yellowstonii
Filtered NCBI Taxonomy d__Bacteria; p__Nitrospirae; c__Nitrospira; o__Nitrospirales; f__Nitrospiraceae; g__Thermodesulfovibrio; s__Thermodesulfovibrio yellowstonii
Unfiltered NCBI Taxonomy d__Bacteria; p__Nitrospirae; c__Nitrospira; o__Nitrospirales; f__Nitrospiraceae; g__Thermodesulfovibrio; s__Thermodesulfovibrio yellowstonii; x__Thermodesulfovibrio yellowstonii DSM 11347
NCBI Strain Identifiers DSM 11347
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.08%
CheckM Contamination 3.67%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 2,003,803 bp
Longest Contig 2,003,803 bp
Scaffold Count 1
N50 Scaffolds 2,003,803 bp
Longest Scaffold 2,003,803 bp
Genome Size 2,003,803 bp
Protein Count 2,007
Coding Density 93.93%
GC Percentage 34.13%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM2098v1
Assembly Type n/a
Bioproject PRJNA59257
Biosample SAMN02603929
Country None
Date 2008-9-26
Genbank Assembly Accession GCA_000020985.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 2,028
Refseq Category reference genome
Seq Rel Date 2008/09/26
Spanned Gaps 0
Species Taxid 28262
SSU Count 1
Submitter The J. Craig Venter Institute
Taxid 289376
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None