Acidithiobacillus ferrooxidans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Acidithiobacillales; f__Acidithiobacillaceae; g__Acidithiobacillus; s__Acidithiobacillus ferrooxidans
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Acidithiobacillia; o__Acidithiobacillales; f__Acidithiobacillaceae; g__Acidithiobacillus; s__Acidithiobacillus ferrooxidans
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Acidithiobacillia; o__Acidithiobacillales; f__Acidithiobacillaceae; g__Acidithiobacillus; s__Acidithiobacillus ferrooxidans; x__Acidithiobacillus ferrooxidans ATCC 53993
NCBI Strain Identifiers ATCC 53993
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000021485.1)
Genome Characteristics
CheckM Completeness 99.34%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 2,885,038 bp
Longest Contig 2,885,038 bp
Scaffold Count 1
N50 Scaffolds 2,885,038 bp
Longest Scaffold 2,885,038 bp
Genome Size 2,885,038 bp
Protein Count 2,913
Coding Density 90.01%
GC Percentage 58.85%
Ambiguous Bases N/A
GTDB representative GCA_000021485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM2082v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02598372
Country None
Date 2008-9-5
Genbank Assembly Accession GCA_000020825.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 2,870
Refseq Category na
Seq Rel Date 2008/09/05
Spanned Gaps 0
Species Taxid 920
SSU Count 2
Submitter US DOE Joint Genome Institute
Taxid 380394
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None