Alteromonas mediterranea
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Alteromonadaceae; g__Alteromonas; s__Alteromonas mediterranea
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Alteromonadaceae; g__Alteromonas; s__Alteromonas mediterranea
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Alteromonadaceae; g__Alteromonas; s__Alteromonas mediterranea; x__Alteromonas mediterranea DE
NCBI Strain Identifiers DE
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (19 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.85%
CheckM Strain Heterogeneity 20.0
5S Count 5
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 1
N50 Contigs 4,480,937 bp
Longest Contig 4,480,937 bp
Scaffold Count 1
N50 Scaffolds 4,480,937 bp
Longest Scaffold 4,480,937 bp
Genome Size 4,480,937 bp
Protein Count 4,033
Coding Density 87.03%
GC Percentage 44.87%
Ambiguous Bases 262
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM2058v3
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603915
Country None
Date 2013-9-13
Genbank Assembly Accession GCA_000020585.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 3,944
Refseq Category na
Seq Rel Date 2013/09/13
Spanned Gaps 0
Species Taxid 314275
SSU Count 5
Submitter The Gordon and Betty Moore Foundation Marine Microbiology Initiative
Taxid 1774373
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None