Halothermothrix orenii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_F; c__Halanaerobiia; o__Halanaerobiales; f__Halothermotrichaceae; g__Halothermothrix; s__Halothermothrix orenii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Halanaerobiales; f__Halanaerobiaceae; g__Halothermothrix; s__Halothermothrix orenii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Halanaerobiales; f__Halanaerobiaceae; g__Halothermothrix; s__Halothermothrix orenii; x__Halothermothrix orenii H 168
NCBI Strain Identifiers H 168;DSM 9562
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.12%
CheckM Contamination 0.88%
CheckM Strain Heterogeneity 100.0
5S Count 3
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 1
N50 Contigs 2,578,146 bp
Longest Contig 2,578,146 bp
Scaffold Count 1
N50 Scaffolds 2,578,146 bp
Longest Scaffold 2,578,146 bp
Genome Size 2,578,146 bp
Protein Count 2,419
Coding Density 87.56%
GC Percentage 37.88%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM2048v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00623047
Country None
Date 2009-1-13
Genbank Assembly Accession GCA_000020485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 2,392
Refseq Category representative genome
Seq Rel Date 2009/01/13
Spanned Gaps 0
Species Taxid 31909
SSU Count 4
Submitter US DOE Joint Genome Institute
Taxid 373903
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None