Clostridium botulinum_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum; x__Clostridium botulinum E; x__Clostridium botulinum E3 str. Alaska E43
NCBI Strain Identifiers Alaska E43
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000827935.1)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 12
16S Count 11
23S Count 11
tRNA Count 20
Contig Count 1
N50 Contigs 3,659,644 bp
Longest Contig 3,659,644 bp
Scaffold Count 1
N50 Scaffolds 3,659,644 bp
Longest Scaffold 3,659,644 bp
Genome Size 3,659,644 bp
Protein Count 3,229
Coding Density 82.53%
GC Percentage 27.36%
Ambiguous Bases N/A
GTDB representative GCA_000827935.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM2028v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603537
Country None
Date 2008-5-16
Genbank Assembly Accession GCA_000020285.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 3,180
Refseq Category na
Seq Rel Date 2008/05/16
Spanned Gaps 0
Species Taxid 1491
SSU Count 11
Submitter Los Alamos National Laboratory
Taxid 508767
Total Gap Length 0
Translation Table 11
tRNA Count (total) 79
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None