Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii; x__Vibrio campbellii ATCC BAA-1116
NCBI Strain Identifiers ATCC BAA-1116;BB120
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.73%
CheckM Contamination 0.09%
CheckM Strain Heterogeneity 0.0
5S Count 10
16S Count 11
23S Count 10
tRNA Count 20
Contig Count 3
N50 Contigs 3,765,351 bp
Longest Contig 3,765,351 bp
Scaffold Count 3
N50 Scaffolds 3,765,351 bp
Longest Scaffold 3,765,351 bp
Genome Size 6,058,377 bp
Protein Count 5,638
Coding Density 85.06%
GC Percentage 45.42%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1770v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603960
Country None
Date 2007-8-28
Genbank Assembly Accession GCA_000017705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 3
Protein Count 5,701
Refseq Category representative genome
Seq Rel Date 2007/08/28
Spanned Gaps 0
Species Taxid 680
SSU Count 11
Submitter The Vibrio harveyi Genome Sequencing Project
Taxid 338187
Total Gap Length 0
Translation Table 11
tRNA Count (total) 121
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None