Xanthobacter autotrophicus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Xanthobacteraceae; g__Xanthobacter; s__Xanthobacter autotrophicus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Xanthobacteraceae; g__Xanthobacter; s__Xanthobacter autotrophicus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Xanthobacteraceae; g__Xanthobacter; s__Xanthobacter autotrophicus; x__Xanthobacter autotrophicus Py2
NCBI Strain Identifiers Py2
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 2
N50 Contigs 5,308,934 bp
Longest Contig 5,308,934 bp
Scaffold Count 2
N50 Scaffolds 5,308,934 bp
Longest Scaffold 5,308,934 bp
Genome Size 5,625,098 bp
Protein Count 5,177
Coding Density 87.63%
GC Percentage 67.35%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1764v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02598342
Country None
Date 2007-7-30
Genbank Assembly Accession GCA_000017645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 5,159
Refseq Category representative genome
Seq Rel Date 2007/07/30
Spanned Gaps 0
Species Taxid 280
SSU Count 2
Submitter US DOE Joint Genome Institute
Taxid 78245
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None