Shewanella putrefaciens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Shewanellaceae; g__Shewanella; s__Shewanella putrefaciens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Shewanellaceae; g__Shewanella; s__Shewanella putrefaciens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Shewanellaceae; g__Shewanella; s__Shewanella putrefaciens; x__Shewanella putrefaciens CN-32
NCBI Strain Identifiers CN-32
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000615005.1)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 1
N50 Contigs 4,659,220 bp
Longest Contig 4,659,220 bp
Scaffold Count 1
N50 Scaffolds 4,659,220 bp
Longest Scaffold 4,659,220 bp
Genome Size 4,659,220 bp
Protein Count 4,052
Coding Density 85.88%
GC Percentage 44.45%
Ambiguous Bases N/A
GTDB representative GCA_000615005.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1658v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00623063
Country None
Date 2007-4-20
Genbank Assembly Accession GCA_000016585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 4,066
Refseq Category na
Seq Rel Date 2007/04/20
Spanned Gaps 0
Species Taxid 24
SSU Count 8
Submitter US DOE Joint Genome Institute
Taxid 319224
Total Gap Length 0
Translation Table 11
tRNA Count (total) 101
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None