Rhodococcus jostii_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Rhodococcus; s__Rhodococcus jostii_A
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Rhodococcus; s__Rhodococcus jostii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Nocardiaceae; g__Rhodococcus; s__Rhodococcus jostii; x__Rhodococcus jostii RHA1
NCBI Strain Identifiers RHA1
GTDB Type Material Designation not type material
GTDB Representative of Species True (4 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 1.62%
CheckM Strain Heterogeneity 12.5
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 4
N50 Contigs 7,804,765 bp
Longest Contig 7,804,765 bp
Scaffold Count 4
N50 Scaffolds 7,804,765 bp
Longest Scaffold 7,804,765 bp
Genome Size 9,702,737 bp
Protein Count 9,061
Coding Density 87.75%
GC Percentage 66.98%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1456v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02604146
Country None
Date 2006-7-28
Genbank Assembly Accession GCA_000014565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 4
CDS Count 9,201
Refseq Category representative genome
Seq Rel Date 2006/07/28
Spanned Gaps 0
Species Taxid 132919
SSU Count 4
Submitter University of British Columbia
Taxid 101510
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None