Lactococcus lactis_E
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis_E
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis; sb__Lactococcus lactis subsp. cremoris; x__Lactococcus lactis subsp. cremoris SK11
NCBI Strain Identifiers SK11
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002078765.2)
Genome Characteristics
CheckM Completeness 99.62%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 6
tRNA Count 20
Contig Count 6
N50 Contigs 2,438,589 bp
Longest Contig 2,438,589 bp
Scaffold Count 6
N50 Scaffolds 2,438,589 bp
Longest Scaffold 2,438,589 bp
Genome Size 2,598,348 bp
Protein Count 2,717
Coding Density 85.09%
GC Percentage 35.78%
Ambiguous Bases N/A
GTDB representative GCA_002078765.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1454v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02598527
Country None
Date 2006-10-13
Genbank Assembly Accession GCA_000014545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 6
CDS Count 2,618
Refseq Category na
Seq Rel Date 2006/10/13
Spanned Gaps 0
Species Taxid 1358
SSU Count 6
Submitter US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Taxid 272622
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None