Rubrobacter_B xylanophilus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Rubrobacteria; o__Rubrobacterales; f__Rubrobacteraceae; g__Rubrobacter_B; s__Rubrobacter_B xylanophilus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Rubrobacteria; o__Rubrobacterales; f__Rubrobacteraceae; g__Rubrobacter; s__Rubrobacter xylanophilus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Rubrobacteria; o__Rubrobacterales; f__Rubrobacteraceae; g__Rubrobacter; s__Rubrobacter xylanophilus; x__Rubrobacter xylanophilus DSM 9941
NCBI Strain Identifiers DSM 9941
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.25%
CheckM Contamination 2.05%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 3,225,748 bp
Longest Contig 3,225,748 bp
Scaffold Count 1
N50 Scaffolds 3,225,748 bp
Longest Scaffold 3,225,748 bp
Genome Size 3,225,748 bp
Protein Count 3,240
Coding Density 92.36%
GC Percentage 70.48%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1418v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02598258
Country None
Date 2006-6-9
Genbank Assembly Accession GCA_000014185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 3,206
Refseq Category representative genome
Seq Rel Date 2006/06/09
Spanned Gaps 0
Species Taxid 49319
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 266117
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None