Roseicyclus sp000013565
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Roseicyclus; s__Roseicyclus sp000013565
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Jannaschia; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Jannaschia; s__Jannaschia sp. CCS1
NCBI Strain Identifiers CCS1
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.39%
CheckM Contamination 0.45%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 2
N50 Contigs 4,317,977 bp
Longest Contig 4,317,977 bp
Scaffold Count 2
N50 Scaffolds 4,317,977 bp
Longest Scaffold 4,317,977 bp
Genome Size 4,404,049 bp
Protein Count 4,358
Coding Density 90.38%
GC Percentage 62.24%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1356v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02598279
Country None
Date 2006-2-27
Genbank Assembly Accession GCA_000013565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 4,320
Refseq Category na
Seq Rel Date 2006/02/27
Spanned Gaps 0
Species Taxid 290400
SSU Count 1
Submitter US DOE Joint Genome Institute
Taxid 290400
Total Gap Length 0
Translation Table 11
tRNA Count (total) 41
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None