Syntrophotalea carbinolica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Desulfobacterota; c__Desulfuromonadia; o__Desulfuromonadales; f__Syntrophotaleaceae; g__Syntrophotalea; s__Syntrophotalea carbinolica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Deltaproteobacteria; o__Desulfuromonadales; f__Desulfuromonadaceae; g__Pelobacter; s__Pelobacter carbinolicus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Deltaproteobacteria; o__Desulfuromonadales; f__Desulfuromonadaceae; g__Pelobacter; s__Pelobacter carbinolicus; x__Pelobacter carbinolicus DSM 2380
NCBI Strain Identifiers DSM 2380
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.35%
CheckM Contamination 0.65%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 3,665,893 bp
Longest Contig 3,665,893 bp
Scaffold Count 1
N50 Scaffolds 3,665,893 bp
Longest Scaffold 3,665,893 bp
Genome Size 3,665,893 bp
Protein Count 3,242
Coding Density 86.66%
GC Percentage 55.11%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1288v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02598295
Country None
Date 2006-3-30
Genbank Assembly Accession GCA_000012885.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 3,229
Refseq Category representative genome
Seq Rel Date 2006/03/30
Spanned Gaps 0
Species Taxid 19
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 338963
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None