Synechococcus elongatus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__Synechococcales; f__Synechococcaceae; g__Synechococcus; s__Synechococcus elongatus
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Synechococcales; f__Synechococcaceae; g__Synechococcus; s__Synechococcus elongatus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Synechococcales; f__Synechococcaceae; g__Synechococcus; s__Synechococcus elongatus; x__Synechococcus elongatus PCC 7942
NCBI Strain Identifiers PCC 7942
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000010065.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 2
N50 Contigs 2,695,903 bp
Longest Contig 2,695,903 bp
Scaffold Count 2
N50 Scaffolds 2,695,903 bp
Longest Scaffold 2,695,903 bp
Genome Size 2,742,269 bp
Protein Count 2,725
Coding Density 88.87%
GC Percentage 55.43%
Ambiguous Bases N/A
GTDB representative GCA_000010065.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1252v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02598254
Country None
Date 2005-11-8
Genbank Assembly Accession GCA_000012525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 2,696
Refseq Category na
Seq Rel Date 2005/11/08
Spanned Gaps 0
Species Taxid 32046
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1140
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None