Synechococcus_E sp000012505
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__PCC-6307; f__Cyanobiaceae; g__Synechococcus_E; s__Synechococcus_E sp000012505
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Synechococcales; f__Synechococcaceae; g__Synechococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Synechococcales; f__Synechococcaceae; g__Synechococcus; s__Synechococcus sp. CC9902
NCBI Strain Identifiers CC9902
GTDB Type Material Designation not type material
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 2,234,828 bp
Longest Contig 2,234,828 bp
Scaffold Count 1
N50 Scaffolds 2,234,828 bp
Longest Scaffold 2,234,828 bp
Genome Size 2,234,828 bp
Protein Count 2,461
Coding Density 90.36%
GC Percentage 54.16%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1250v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02598312
Country None
Date 2005-10-26
Genbank Assembly Accession GCA_000012505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 2,347
Refseq Category na
Seq Rel Date 2005/10/26
Spanned Gaps 0
Species Taxid 316279
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 316279
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None