Chlamydia trachomatis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Verrucomicrobiota_A; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia trachomatis
Filtered NCBI Taxonomy d__Bacteria; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; g__Chlamydia; s__Chlamydia trachomatis
Unfiltered NCBI Taxonomy d__Bacteria; x__PVC group; p__Chlamydiae; c__Chlamydiia; o__Chlamydiales; f__Chlamydiaceae; x__Chlamydia/Chlamydophila group; g__Chlamydia; s__Chlamydia trachomatis; x__Chlamydia trachomatis A/HAR-13
NCBI Strain Identifiers A;HAR-13;A/HAR-13
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (169 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.92%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 2
N50 Contigs 1,044,459 bp
Longest Contig 1,044,459 bp
Scaffold Count 2
N50 Scaffolds 1,044,459 bp
Longest Scaffold 1,044,459 bp
Genome Size 1,051,969 bp
Protein Count 916
Coding Density 89.78%
GC Percentage 41.27%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1212v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603498
Country None
Date 2005-9-23
Genbank Assembly Accession GCA_000012125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 933
Refseq Category na
Seq Rel Date 2005/09/23
Spanned Gaps 0
Species Taxid 813
SSU Count 2
Submitter Lab of Human Bacterial Pathogenesis
Taxid 315277
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None