Aliivibrio fischeri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Aliivibrio; s__Aliivibrio fischeri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Aliivibrio; s__Aliivibrio fischeri
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Aliivibrio; s__Aliivibrio fischeri; x__Aliivibrio fischeri ES114
NCBI Strain Identifiers ES114
GTDB Type Material Designation not type material
GTDB Representative of Species True (31 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.8%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 12
16S Count 12
23S Count 12
tRNA Count 20
Contig Count 3
N50 Contigs 2,897,536 bp
Longest Contig 2,897,536 bp
Scaffold Count 3
N50 Scaffolds 2,897,536 bp
Longest Scaffold 2,897,536 bp
Genome Size 4,273,718 bp
Protein Count 3,819
Coding Density 87.17%
GC Percentage 38.35%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1180v1
Assembly Type n/a
Bioproject PRJNA58163
Biosample SAMN02604303
Country None
Date 2008-4-2
Genbank Assembly Accession GCA_000011805.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 3
CDS Count 3,815
Refseq Category reference genome
Seq Rel Date 2008/04/02
Spanned Gaps 0
Species Taxid 668
SSU Count 12
Submitter W.M. Keck Microbial Communities and Cell-signaling Program
Taxid 312309
Total Gap Length 0
Translation Table 11
tRNA Count (total) 118
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None