Streptococcus pyogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes; x__Streptococcus pyogenes serotype M1; x__Streptococcus pyogenes MGAS5005
NCBI Strain Identifiers MGAS5005
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002055535.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 1,838,562 bp
Longest Contig 1,838,562 bp
Scaffold Count 1
N50 Scaffolds 1,838,562 bp
Longest Scaffold 1,838,562 bp
Genome Size 1,838,562 bp
Protein Count 1,768
Coding Density 85.68%
GC Percentage 38.54%
Ambiguous Bases N/A
GTDB representative GCA_002055535.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM1176v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603500
Country None
Date 2014-4-1
Genbank Assembly Accession GCA_000011765.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 1,807
Refseq Category na
Seq Rel Date 2014/04/01
Spanned Gaps 0
Species Taxid 1314
SSU Count 6
Submitter Lab of Human Bacterial Pathogenesis
Taxid 293653
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None