Buchnera aphidicola_I
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Buchnera; s__Buchnera aphidicola_I
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Buchnera; s__Buchnera aphidicola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Buchnera; s__Buchnera aphidicola; x__Buchnera aphidicola (Acyrthosiphon pisum); x__Buchnera aphidicola str. APS (Acyrthosiphon pisum)
NCBI Strain Identifiers APS;Tokyo1998
GTDB Type Material Designation not type material
GTDB Representative of Species True (9 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 3
N50 Contigs 640,681 bp
Longest Contig 640,681 bp
Scaffold Count 3
N50 Scaffolds 640,681 bp
Longest Scaffold 640,681 bp
Genome Size 655,725 bp
Protein Count 594
Coding Density 87.37%
GC Percentage 26.36%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM960v1
Assembly Type n/a
Bioproject PRJNA57805
Biosample SAMD00061095
Country None
Date 2004-5-11
Genbank Assembly Accession GCA_000009605.1
Genome Category Isolate
Genome Representation full
Isolate Tokyo1998
Isolation Source None
Latitude Longitude None
Molecule Count 3
CDS Count 575
Refseq Category reference genome
Seq Rel Date 2004/05/11
Spanned Gaps 0
Species Taxid 9
SSU Count 1
Submitter Rikken GSC
Taxid 107806
Total Gap Length 0
Translation Table 11
tRNA Count (total) 31
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None