Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Typhimurium; x__Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
NCBI Strain Identifiers LT2;ATCC 700720;SGSC 1412
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (10,510 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 2
N50 Contigs 4,857,450 bp
Longest Contig 4,857,450 bp
Scaffold Count 2
N50 Scaffolds 4,857,450 bp
Longest Scaffold 4,857,450 bp
Genome Size 4,951,383 bp
Protein Count 4,629
Coding Density 87.17%
GC Percentage 52.24%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM694v2
Assembly Type n/a
Bioproject PRJNA57799
Biosample SAMN02604315
Country None
Date 2016-1-13
Genbank Assembly Accession GCA_000006945.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 4,549
Refseq Category reference genome
Seq Rel Date 2016/01/13
Spanned Gaps 0
Species Taxid 28901
SSU Count 7
Submitter Washington University Genome Sequencing Center
Taxid 99287
Total Gap Length 0
Translation Table 11
tRNA Count (total) 85
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None