Bifidobacterium longum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium longum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium longum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium longum; sb__Bifidobacterium longum subsp. longum; x__Bifidobacterium longum subsp. longum ATCC 55813
NCBI Strain Identifiers ATCC 55813
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000196555.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 140
N50 Contigs 137,057 bp
Longest Contig 325,479 bp
Scaffold Count 114
N50 Scaffolds 323,391 bp
Longest Scaffold 630,786 bp
Genome Size 2,396,359 bp
Protein Count 2,001
Coding Density 86.57%
GC Percentage 60.25%
Ambiguous Bases N/A
GTDB representative GCA_000196555.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM313v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00001475
Country None
Date 2009-05-05
Genbank Assembly Accession GCA_000003135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count 1
CDS Count 2,069
Refseq Category na
Seq Rel Date 2009/05/05
Spanned Gaps 26
Species Taxid 216816
SSU Count 1
Submitter Baylor College of Medicine
Taxid 548480
Total Gap Length 23501
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACHI00000000.1