Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Lachnospirales; f__Lachnospiraceae; g__Eubacterium_H; s__Eubacterium_H sp900317175
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; x__environmental samples; s__uncultured Clostridiales bacterium
NCBI Strain Identifiers RUG607
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 87.31%
CheckM Contamination 0.48%
CheckM Strain Heterogeneity 66.67
5S Count 0
16S Count 0
23S Count 0
tRNA Count 15
Contig Count 164
N50 Contigs 19,193 bp
Longest Contig 65,060 bp
Scaffold Count 162
N50 Scaffolds 19,193 bp
Longest Scaffold 65,060 bp
Genome Size 1,857,179 bp
Protein Count 1,737
Coding Density 88.79%
GC Percentage 51.34%
Ambiguous Bases 0
GTDB representative GCA_900317175.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Rumen uncultured genome RUG607
Assembly Type n/a
Bioproject PRJEB21624
Biosample SAMEA104666652
Country None
Date 2018-3-21
Genbank Assembly Accession GCA_900320555.1
Genome Category MAG
Genome Representation full
Isolate RUG607
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 0
Refseq Category na
Seq Rel Date 2018/03/21
Spanned Gaps 2
Species Taxid 172733
SSU Count 0
Submitter THE ROSLIN INSTITUTE
Taxid 172733
Total Gap Length 79
Translation Table None
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ONSS00000000.1