Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Prevotella; s__Prevotella sp900320045
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; x__environmental samples; s__uncultured Prevotellaceae bacterium
NCBI Strain Identifiers RUG546
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 88.72%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 0
tRNA Count 15
Contig Count 77
N50 Contigs 56,556 bp
Longest Contig 195,952 bp
Scaffold Count 75
N50 Scaffolds 56,556 bp
Longest Scaffold 195,952 bp
Genome Size 2,313,415 bp
Protein Count 1,867
Coding Density 93.10%
GC Percentage 52.00%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Rumen uncultured genome RUG546
Assembly Type n/a
Bioproject PRJEB21624
Biosample SAMEA104667085
Country None
Date 2018-3-21
Genbank Assembly Accession GCA_900320045.1
Genome Category MAG
Genome Representation full
Isolate RUG546
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 0
Refseq Category na
Seq Rel Date 2018/03/21
Spanned Gaps 2
Species Taxid 370804
SSU Count 0
Submitter THE ROSLIN INSTITUTE
Taxid 370804
Total Gap Length 75
Translation Table None
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ONQT00000000.1