Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Prevotella; s__Prevotella sp900319305
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; x__environmental samples; s__uncultured Prevotella sp.
NCBI Strain Identifiers RUG473
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 90.15%
CheckM Contamination 1.83%
CheckM Strain Heterogeneity 30.0
5S Count 2
16S Count 0
23S Count 0
tRNA Count 17
Contig Count 231
N50 Contigs 17,168 bp
Longest Contig 85,122 bp
Scaffold Count 228
N50 Scaffolds 17,168 bp
Longest Scaffold 85,122 bp
Genome Size 2,677,173 bp
Protein Count 2,703
Coding Density 92.34%
GC Percentage 49.34%
Ambiguous Bases 9
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Rumen uncultured genome RUG473
Assembly Type n/a
Bioproject PRJEB21624
Biosample SAMEA104666967
Country None
Date 2018-03-21
Genbank Assembly Accession GCA_900319305.1
Genome Category MAG
Genome Representation full
Isolate RUG473
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count N/A
Refseq Category na
Seq Rel Date 2018/03/21
Spanned Gaps 3
Species Taxid 159272
SSU Count 0
Submitter THE ROSLIN INSTITUTE
Taxid 159272
Total Gap Length 51
Translation Table None
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ONNY00000000.1