Ruminococcus_E sp900314795
Isolate HQ 5S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Oscillospirales; f__Acutalibacteraceae; g__Ruminococcus_E; s__Ruminococcus_E sp900314795
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; x__environmental samples; s__uncultured Clostridiales bacterium
NCBI Strain Identifiers RUG041
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 98.32%
CheckM Contamination 0.67%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 0
23S Count 0
tRNA Count 19
Contig Count 71
N50 Contigs 57,074 bp
Longest Contig 219,010 bp
Scaffold Count 67
N50 Scaffolds 63,873 bp
Longest Scaffold 219,010 bp
Genome Size 2,527,405 bp
Protein Count 2,188
Coding Density 84.60%
GC Percentage 51.06%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Rumen uncultured genome RUG041
Assembly Type n/a
Bioproject PRJEB21624
Biosample SAMEA104666469
Country None
Date 2018-3-21
Genbank Assembly Accession GCA_900314795.1
Genome Category MAG
Genome Representation full
Isolate RUG041
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 0
Refseq Category na
Seq Rel Date 2018/03/21
Spanned Gaps 4
Species Taxid 172733
SSU Count 0
Taxid 172733
Total Gap Length 112
Translation Table None
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master OMWP00000000.1