Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii
NCBI Strain Identifiers DS40M4
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.39%
CheckM Strain Heterogeneity 0.0
5S Count 12
16S Count 12
23S Count 12
tRNA Count 20
Contig Count 3
N50 Contigs 3,261,651 bp
Longest Contig 3,261,651 bp
Scaffold Count 3
N50 Scaffolds 3,261,651 bp
Longest Scaffold 3,261,651 bp
Genome Size 5,217,024 bp
Protein Count 4,798
Coding Density 84.20%
GC Percentage 45.06%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM331258v1
Assembly Type n/a
Bioproject PRJNA479421
Biosample SAMN09537147
Country None
Date 2018-7-11
Genbank Assembly Accession GCA_003312585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 3
Protein Count 4,937
Refseq Category na
Seq Rel Date 2018/07/11
Spanned Gaps 0
Species Taxid 680
SSU Count 12
Submitter Naval Research Laboratory
Taxid 680
Total Gap Length 0
Translation Table 11
tRNA Count (total) 135
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None