Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Chloroflexota; c__Dehalococcoidia; o__SM23-28-2; f__HRbin24; g__HRBIN25; s__HRBIN25 sp002898615
Filtered NCBI Taxonomy d__Bacteria; p__; c__; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__unclassified Bacteria; x__unclassified Bacteria (miscellaneous); s__bacterium HR25
NCBI Strain Identifiers HRbin25
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 61.75%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 14
Contig Count 106
N50 Contigs 13,954 bp
Longest Contig 74,878 bp
Scaffold Count 106
N50 Scaffolds 13,954 bp
Longest Scaffold 74,878 bp
Genome Size 989,871 bp
Protein Count 1,075
Coding Density 92.20%
GC Percentage 69.51%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM289861v1
Assembly Type n/a
Bioproject PRJDB6348
Biosample SAMD00093775
Country None
Date 2017-12-4
Genbank Assembly Accession GCA_002898615.1
Genome Category MAG
Genome Representation full
Isolate HRbin25
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 982
Refseq Category na
Seq Rel Date 2017/12/04
Spanned Gaps 0
Species Taxid 2035420
SSU Count 1
Submitter Japan Agency for Marine-Earth Science and Technology
Taxid 2035420
Total Gap Length 0
Translation Table 11
tRNA Count (total) 22
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BEIB00000000.1