Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Winogradskyella; s__Winogradskyella sp002722255
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Winogradskyella; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Winogradskyella; s__Winogradskyella sp.
NCBI Strain Identifiers SP247
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 84.38%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 0
tRNA Count 19
Contig Count 17
N50 Contigs 284,301 bp
Longest Contig 1,092,566 bp
Scaffold Count 17
N50 Scaffolds 284,301 bp
Longest Scaffold 1,092,566 bp
Genome Size 3,208,965 bp
Protein Count 2,903
Coding Density 92.26%
GC Percentage 33.77%
Ambiguous Bases 2,989
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM272225v1
Assembly Type n/a
Bioproject PRJNA391943
Biosample SAMN07620226
Country None
Date 2017-10-25
Genbank Assembly Accession GCA_002722255.1
Genome Category MAG
Genome Representation full
Isolate SP247
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,873
Refseq Category na
Seq Rel Date 2017/10/25
Spanned Gaps 0
Species Taxid 1883156
SSU Count 1
Submitter Tara Oceans Consortium
Taxid 1883156
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master PBLD00000000.1