Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Spirosomaceae; g__Runella; s__Runella zeae
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Cytophagia; o__Cytophagales; f__Cytophagaceae; g__Runella; s__Runella zeae
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Cytophagia; o__Cytophagales; f__Cytophagaceae; g__Runella; s__Runella zeae
NCBI Strain Identifiers UBA7670
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.3%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 0
tRNA Count 19
Contig Count 86
N50 Contigs 183,644 bp
Longest Contig 584,127 bp
Scaffold Count 51
N50 Scaffolds 345,314 bp
Longest Scaffold 804,289 bp
Genome Size 7,325,983 bp
Protein Count 6,167
Coding Density 89.86%
GC Percentage 42.20%
Ambiguous Bases 0
GTDB representative GCF_000423565.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM248318v1
Assembly Type n/a
Bioproject PRJNA348753
Biosample SAMN06456977
Country None
Date 2017-10-6
Genbank Assembly Accession GCA_002483185.1
Genome Category MAG
Genome Representation full
Isolate UBA7670
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 0
Refseq Category na
Seq Rel Date 2017/10/06
Spanned Gaps 35
Species Taxid 94255
SSU Count 0
Submitter University of Queensland
Taxid 94255
Total Gap Length 2647
Translation Table None
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master DLHK00000000.1