Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Spongiibacteraceae; g__Spongiibacter; s__Spongiibacter tropicus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Cellvibrionales; f__Spongiibacteraceae; g__Spongiibacter; s__Spongiibacter tropicus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Cellvibrionales; f__Spongiibacteraceae; g__Spongiibacter; s__Spongiibacter tropicus
NCBI Strain Identifiers UBA6512
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 93.43%
CheckM Contamination 0.48%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 0
tRNA Count 14
Contig Count 207
N50 Contigs 31,963 bp
Longest Contig 139,489 bp
Scaffold Count 144
N50 Scaffolds 41,869 bp
Longest Scaffold 186,622 bp
Genome Size 3,634,064 bp
Protein Count 3,464
Coding Density 90.71%
GC Percentage 57.33%
Ambiguous Bases 0
GTDB representative GCF_000420325.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM243510v1
Assembly Type n/a
Bioproject PRJNA348753
Biosample SAMN06454708
Country None
Date 2017-10-4
Genbank Assembly Accession GCA_002435105.1
Genome Category MAG
Genome Representation full
Isolate UBA6512
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 0
Refseq Category na
Seq Rel Date 2017/10/04
Spanned Gaps 63
Species Taxid 454602
SSU Count 0
Submitter University of Queensland
Taxid 454602
Total Gap Length 18704
Translation Table None
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master DJLQ00000000.1