Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__UBA932; g__RC9; s__RC9 sp002297815
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; x__unclassified Bacteroidales; x__unclassified Bacteroidales (miscellaneous); s__Bacteroidales bacterium UBA4624
NCBI Strain Identifiers UBA4624
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 87.14%
CheckM Contamination 1.92%
CheckM Strain Heterogeneity 60.0
5S Count 0
16S Count 0
23S Count 1
tRNA Count 18
Contig Count 246
N50 Contigs 24,727 bp
Longest Contig 97,004 bp
Scaffold Count 152
N50 Scaffolds 29,203 bp
Longest Scaffold 117,296 bp
Genome Size 2,801,532 bp
Protein Count 2,412
Coding Density 90.05%
GC Percentage 48.22%
Ambiguous Bases 0
GTDB representative GCA_002297815.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM240615v1
Assembly Type n/a
Bioproject PRJNA348753
Biosample SAMN06455119
Country None
Date 2017-9-28
Genbank Assembly Accession GCA_002406155.1
Genome Category MAG
Genome Representation full
Isolate UBA4624
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 0
Refseq Category na
Seq Rel Date 2017/09/28
Spanned Gaps 94
Species Taxid 1950580
SSU Count 0
Submitter University of Queensland
Taxid 1950580
Total Gap Length 9396
Translation Table None
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master DHNE00000000.1