Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Verrucomicrobiota; c__Lentisphaeria; o__Victivallales; f__UBA1829; g__UBA1829; s__UBA1829 sp002405835
Filtered NCBI Taxonomy d__Bacteria; p__Lentisphaerae; c__Lentisphaeria; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__PVC group; p__Lentisphaerae; c__Lentisphaeria; x__unclassified Lentisphaeria; s__Lentisphaeria bacterium UBA4640
NCBI Strain Identifiers UBA4640
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 93.21%
CheckM Contamination 1.35%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 0
tRNA Count 17
Contig Count 136
N50 Contigs 49,401 bp
Longest Contig 197,567 bp
Scaffold Count 71
N50 Scaffolds 75,975 bp
Longest Scaffold 211,361 bp
Genome Size 3,467,831 bp
Protein Count 2,889
Coding Density 92.70%
GC Percentage 54.67%
Ambiguous Bases 6
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM240583v1
Assembly Type n/a
Bioproject PRJNA348753
Biosample SAMN06452111
Country None
Date 2017-9-28
Genbank Assembly Accession GCA_002405835.1
Genome Category MAG
Genome Representation full
Isolate UBA4640
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count N/A
Refseq Category na
Seq Rel Date 2017/09/28
Spanned Gaps 65
Species Taxid 1948697
SSU Count 0
Submitter University of Queensland
Taxid 1948697
Total Gap Length 5689
Translation Table None
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master DHMO00000000.1