Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas bentonitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers UBA3130
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 87.23%
CheckM Contamination 0.55%
CheckM Strain Heterogeneity 50.0
5S Count 1
16S Count 0
23S Count 0
tRNA Count 16
Contig Count 253
N50 Contigs 32,191 bp
Longest Contig 120,646 bp
Scaffold Count 164
N50 Scaffolds 34,126 bp
Longest Scaffold 178,443 bp
Genome Size 3,687,970 bp
Protein Count 3,292
Coding Density 89.17%
GC Percentage 67.04%
Ambiguous Bases 0
GTDB representative GCF_002887735.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM236521v1
Assembly Type n/a
Bioproject PRJNA348753
Biosample SAMN06452411
Country None
Date 2017-9-26
Genbank Assembly Accession GCA_002365215.1
Genome Category MAG
Genome Representation full
Isolate UBA3130
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 0
Refseq Category na
Seq Rel Date 2017/09/26
Spanned Gaps 89
Species Taxid 40324
SSU Count 0
Submitter University of Queensland
Taxid 40324
Total Gap Length 18985
Translation Table None
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master DEZO00000000.1