Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
NCBI Strain Identifiers SKN1
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 94.79%
CheckM Contamination 0.61%
CheckM Strain Heterogeneity 66.67
5S Count 3
16S Count 2
23S Count 5
tRNA Count 20
Contig Count 346
N50 Contigs 39,085 bp
Longest Contig 158,649 bp
Scaffold Count 346
N50 Scaffolds 39,085 bp
Longest Scaffold 158,649 bp
Genome Size 2,398,624 bp
Protein Count 3,413
Coding Density 85.37%
GC Percentage 40.18%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM221592v1
Assembly Type n/a
Bioproject PRJNA389152
Biosample SAMN07191094
Country None
Date 2017-7-7
Genbank Assembly Accession GCA_002215925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,410
Refseq Category na
Seq Rel Date 2017/07/07
Spanned Gaps 0
Species Taxid 747
SSU Count 4
Submitter Department of Veterinary Pathology, College of Veterinary Science and Animal Husbandry, Sardarkrushinagar Dantiwada Agricultural University, Palanpur, Gujarat 385 506, India
Taxid 747
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master NIOC00000000.1