Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. salmonicida
NCBI Strain Identifiers M15879-11
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 3.6%
CheckM Strain Heterogeneity 44.44
5S Count 7
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 916
N50 Contigs 10,413 bp
Longest Contig 65,687 bp
Scaffold Count 916
N50 Scaffolds 10,413 bp
Longest Scaffold 65,687 bp
Genome Size 5,034,660 bp
Protein Count 5,824
Coding Density 85.87%
GC Percentage 58.09%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM211058v1
Assembly Type n/a
Bioproject PRJNA264317
Biosample SAMN03421178
Country None
Date 2017-4-26
Genbank Assembly Accession GCA_002110585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,553
Refseq Category na
Seq Rel Date 2017/04/26
Spanned Gaps 0
Species Taxid 645
SSU Count 4
Submitter Universite Laval
Taxid 29491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 100
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LAIS00000000.1